- satisfies(Graph, Set<Node>, Set<Node>, Node) - Static method in class edu.claflin.finder.logic.BronKerboschBipartiteUtils
-
Private method for stepping through the adjacency lists and determining
if the graph is bipartite.
- satisfies(Graph) - Method in class edu.claflin.finder.logic.cond.BipartiteCondition
-
Used to test if the supplied graph is within the bounds of the
condition's implementation.
- satisfies(Graph, Set<Node>, Set<Node>, Node) - Method in class edu.claflin.finder.logic.cond.BipartiteCondition
-
Private method for stepping through the adjacency lists and determining
if the graph is bipartite.
- satisfies(Graph) - Method in class edu.claflin.finder.logic.cond.CliqueCondition
-
Used to test if the supplied graph is within the bounds of the
condition's implementation.
- satisfies(Graph) - Method in class edu.claflin.finder.logic.cond.DirectedCliqueCondition
-
Used to test if the supplied graph is within the bounds of the
condition's implementation.
- satisfies(Graph) - Method in class edu.claflin.finder.logic.Condition
-
Used to test if the supplied graph is within the bounds of the
condition's implementation.
- searchNode(Graph, Node) - Method in class edu.claflin.finder.algo.BreadthFirstTraversalSearch
-
Helper method to search for the SubGraphs.
- searchNode(Graph, Graph, Node, List<Node>) - Method in class edu.claflin.finder.algo.DepthFirstTraversalSearch
-
Helper method to search for the SubGraphs.
- setData(D) - Method in class edu.claflin.finder.logic.Edge
-
Access method for the Edge's data (such as weight).
- setFileLogs(boolean[]) - Method in class edu.claflin.finder.log.LogUtil
-
Sets the FileLogs HashMap for selective logging to the file.
- setForceOnAdd(boolean) - Method in class edu.claflin.finder.logic.ConditionedGraph
-
Accessor method for configuring if conditions are forced on add of
network components.
- setGraphSortOrder(Algorithm.GraphSortOrder) - Method in class edu.claflin.finder.algo.Algorithm
-
- setGroup(String) - Method in class edu.claflin.finder.logic.cygrouper.CygrouperNode
-
- setGroups(ArrayList<Map<String, CygrouperNode>>) - Method in interface edu.claflin.finder.logic.cygrouper.CommunicationListener
-
- setGroups(ArrayList<Map<String, CygrouperNode>>) - Method in class edu.claflin.finder.logic.cygrouper.Communicator
-
- setOutput(File) - Static method in class edu.claflin.finder.Global
-
Sets the output directory for storing results.
- setPartiteNumber(int) - Method in class edu.claflin.finder.algo.Algorithm
-
- setPartiteNumber(int) - Method in class edu.claflin.finder.logic.cygrouper.CygrouperNode
-
- setPartitionNumbers(ArrayList<Map<String, CygrouperNode>>) - Method in interface edu.claflin.finder.logic.cygrouper.CommunicationListener
-
- setPartitionNumbers(ArrayList<Map<String, CygrouperNode>>) - Method in class edu.claflin.finder.logic.cygrouper.Communicator
-
- setProgress(double) - Method in class edu.claflin.finder.algo.Algorithm
-
- setTerminalLogs(boolean[]) - Method in class edu.claflin.finder.log.LogUtil
-
Sets the TerminalLogs HashMap for selective terminal logging.
- setUndirected(boolean) - Method in class edu.claflin.finder.logic.Edge
-
Access method for the Edge's undirectedness parameter.
- setUniqueSubGraphs(ArrayList<Graph>) - Method in interface edu.claflin.finder.logic.cygrouper.CommunicationListener
-
- setUniqueSubGraphs(ArrayList<Graph>) - Method in class edu.claflin.finder.logic.cygrouper.Communicator
-
- SIFGraphIO - Class in edu.claflin.finder.io.graph
-
A class for reading and writing graphs in the SIF format.
- SIFGraphIO(String) - Constructor for class edu.claflin.finder.io.graph.SIFGraphIO
-
Constructs the SIFGraphIO object.
- SimpleGraphIO - Class in edu.claflin.finder.io.graph
-
A class for reading and writing graphs.
- SimpleGraphIO() - Constructor for class edu.claflin.finder.io.graph.SimpleGraphIO
-
Empty Constructor for instantiating the class.
- sortOrder - Variable in class edu.claflin.finder.algo.Algorithm
-
- source - Variable in class edu.claflin.finder.logic.cygrouper.CygrouperEdge
-
- source - Variable in class edu.claflin.finder.logic.Edge
-
The node representing the source.
- superAddPartialGraph(List<Node>, List<Edge>) - Method in class edu.claflin.finder.logic.ConditionedGraph
-
Private method for circumventing the condition restrictions.
- suppressLog - Variable in class edu.claflin.finder.logic.Graph
-
Used to suppress logging.